MRIQC: individual bold report

Summary

  • BIDS filename: sub-06400_ses-07_task-breathhold_bold.
  • Date and time: 2023-10-17, 17:47.
  • MRIQC version: 22.0.0rc1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
2023-10-17T17:37:21.962592 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
Standard deviation map
2023-10-17T17:37:24.019444 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
FMRI summary plot
2023-10-17T17:47:00.823763 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/

Other

aor0.002876610878661088
aqi0.011800622343096234
dummy_trs0
dvarsnstd53.92713813651258
dvarsstd1.589535707983193
dvarsvstd1.0370789982773112
efc0.5280409799351818
fber3837.06982421875
fdmean0.10770813171413707
fdnum18
fdperc7.531380753138075
fwhmavg1.4738987939284696
fwhmx1.6559127272727272
fwhmy1.7625861818181818
fwhmz1.0031974726944999
gcor0.0244545
gsrx-0.020716609433293343
gsry0.06961032003164291
sizet239
sizex64
sizey64
sizez15
snr3.406472405493407
spacingtr2.5
spacingx3.4375
spacingy3.4375
spacingz7.799999713897705
summarybgk80.81292156463789
summarybgmad28.60154306845596
summarybgmean151.8267822265625
summarybgmedian41.385719299316406
summarybgn30698.0
summarybgp0517.303435611724854
summarybgp95681.8534515380859
summarybgstdv319.4868469238281
summaryfgk12.470102113014299
summaryfgmad497.46480507944153
summaryfgmean2763.017333984375
summaryfgmedian2587.940673828125
summaryfgn11689.0
summaryfgp051998.742822265625
summaryfgp954070.2684082031255
summaryfgstdv759.6802978515625
tsnr49.59454345703125
AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime10:32:20.430000
BandwidthPerPixelPhaseEncode85.227
BaseResolution64
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DerivedVendorReportedEchoSpacing0.000550002
DeviceSerialNumber66073
DwellTime3.5e-06
EchoTime0.09
EchoTrainLength21
EffectiveEchoSpacing0.000183334
FlipAngle90
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageOrientationTextTra
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.254
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaindy Road *,CARDIFF-Note:body18, flex Coils and interface in Co
InstitutionNameCUBRIC
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
MatrixCoilModeGRAPPA
ModalityMR
ParallelReductionFactorInPlane3
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps63
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescription3TWproj^314_WAND
ProtocolNamemg_ep2d_se_CBV_VE11c_BHold
PulseSequenceDetails%CustomerSeq%\mg_ep2d_se_VE11c
PulseSequenceTypeSpin Echo EPI
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE64
RefLinesPE36
RepetitionTime2.5
SAR0.0906502
ScanOptionsFS
ScanningSequenceEP
SequenceNameepse2d1_64
SequenceVariantSK\SP
SeriesDescriptionmg_ep2d_se_CBV_VE11c_BHold
SeriesNumber19
ShimSetting[9783, 86, -2694, 203, 45, 6, -3, 55]
SliceThickness6.5
SliceTiming[0, 1.335, 0.1675, 1.5, 0.335, 1.6675, 0.5, 1.835, 0.6675, 2, 0.835, 2.1675, 1, 2.335, 1.1675]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices7.8
SpoilingStateTrue
StationNameAWP66073
TaskNamebreathhold
TotalReadoutTime0.01155
TxRefAmp242.255
md5sumf3f27f317ef950a4a8634c2d5b50f1cc
softwaremriqc
version22.0.0rc1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.