MRIQC: individual bold report

Summary

  • BIDS filename: sub-36346_ses-07_task-breathhold_bold.
  • Date and time: 2023-10-18, 10:36.
  • MRIQC version: 22.0.0rc1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
2023-10-18T10:26:26.062731 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
Standard deviation map
2023-10-18T10:26:28.811417 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
FMRI summary plot
2023-10-18T10:36:14.079695 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/

Other

aor0.006539873949579831
aqi0.024831805546218486
dummy_trs1
dvarsnstd57.91957567122363
dvarsstd1.5578407789029536
dvarsvstd1.0388028181434599
efc0.5116447096606485
fber4885.0234375
fdmean0.25129024786640314
fdnum88
fdperc36.97478991596638
fwhmavg1.456054524499824
fwhmx1.6197294545454546
fwhmy1.7028392727272728
fwhmz1.0455948462267448
gcor0.0229584
gsrx-0.02710673026740551
gsry0.07764411717653275
sizet238
sizex64
sizey64
sizez15
snr4.000642391516815
spacingtr2.5
spacingx3.4375
spacingy3.4375
spacingz7.800000190734863
summarybgk69.83260763965566
summarybgmad19.966440212509056
summarybgmean130.38133239746094
summarybgmedian32.06650161743164
summarybgn32491.0
summarybgp0515.054048538208008
summarybgp95588.7950744628906
summarybgstdv300.316650390625
summaryfgk33.628321803647175
summaryfgmad371.50668863453535
summaryfgmean2393.116455078125
summaryfgmedian2289.263671875
summaryfgn10250.0
summaryfgp051801.2130493164063
summaryfgp953249.352038574218
summaryfgstdv572.1961059570312
tsnr34.70819091796875
AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime10:16:55.045000
BandwidthPerPixelPhaseEncode85.227
BaseResolution64
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DerivedVendorReportedEchoSpacing0.000550002
DeviceSerialNumber66073
DwellTime3.5e-06
EchoTime0.09
EchoTrainLength21
EffectiveEchoSpacing0.000183334
FlipAngle90
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageOrientationTextTra
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.254
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaindy Road *,CARDIFF-Note:body18 in Connectome,Wales,GB,CF24 4HQ
InstitutionNameCUBRIC
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
MatrixCoilModeGRAPPA
ModalityMR
ParallelReductionFactorInPlane3
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps63
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescription3TWproj^314_WAND
ProtocolNamemg_ep2d_se_CBV_VE11c_BHold
PulseSequenceDetails%CustomerSeq%\mg_ep2d_se_VE11c
PulseSequenceTypeSpin Echo EPI
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE64
RefLinesPE36
RepetitionTime2.5
SAR0.0980283
ScanOptionsFS
ScanningSequenceEP
SequenceNameepse2d1_64
SequenceVariantSK\SP
SeriesDescriptionmg_ep2d_se_CBV_VE11c_BHold
SeriesNumber18
ShimSetting[9787, 107, -2647, 365, 23, 121, -17, 16]
SliceThickness6.5
SliceTiming[0, 1.3325, 0.1675, 1.5, 0.3325, 1.6675, 0.5, 1.8325, 0.6675, 2, 0.8325, 2.1675, 1, 2.3325, 1.1675]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices7.8
SpoilingStateTrue
StationNameAWP66073
TaskNamebreathhold
TotalReadoutTime0.01155
TxRefAmp247.381
md5sum27af3631337f45d719e6a81621c64be3
softwaremriqc
version22.0.0rc1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.