MRIQC: individual bold report

Summary

  • BIDS filename: sub-20609_ses-07_task-breathhold_bold.
  • Date and time: 2023-10-18, 02:33.
  • MRIQC version: 22.0.0rc1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
2023-10-18T02:24:42.652004 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
Standard deviation map
2023-10-18T02:24:48.813765 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
FMRI summary plot
2023-10-18T02:33:26.557271 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/

Other

aor0.0027765271966527193
aqi0.01939789585774059
dummy_trs0
dvarsnstd67.45042643029409
dvarsstd1.7203489933193286
dvarsvstd1.0144937464285722
efc0.49630826602508854
fber5042.1259765625
fdmean0.24369619588880623
fdnum134
fdperc56.06694560669456
fwhmavg1.4715308447718247
fwhmx1.5870632727272729
fwhmy1.8000523636363637
fwhmz1.0274768979518376
gcor0.0249412
gsrx-0.03207257390022278
gsry0.07528597861528397
sizet239
sizex64
sizey64
sizez15
snr3.6193903043682254
spacingtr2.5
spacingx3.4375
spacingy3.4375
spacingz7.800000190734863
summarybgk68.54022404872829
summarybgmad27.077791546165827
summarybgmean155.968017578125
summarybgmedian41.0540657043457
summarybgn32465.0
summarybgp0517.24736557006836
summarybgp95799.3195434570313
summarybgstdv382.3963623046875
summaryfgk9.47796085432226
summaryfgmad551.4217890167179
summaryfgmean3120.571044921875
summaryfgmedian2939.5869140625
summaryfgn9812.0
summaryfgp052266.0525512695312
summaryfgp954523.8197509765605
summaryfgstdv812.135986328125
tsnr39.05070495605469
AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime10:18:45.067500
BandwidthPerPixelPhaseEncode85.227
BaseResolution64
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DerivedVendorReportedEchoSpacing0.000550002
DeviceSerialNumber66073
DwellTime3.5e-06
EchoTime0.09
EchoTrainLength21
EffectiveEchoSpacing0.000183334
FlipAngle90
FrameTimesStart[0, 0.15, 0.3, 0.45, 0.6, 0.75, 0.9, 1.05, 1.2, 1.35, 1.5, 1.65, 1.8, 1.95, 2.1, 2.25, 2.4, 2.5525, 2.7025, 2.8525, 3.0025, 3.1525, 3.3025, 3.4525, 3.6025, 3.7525, 3.9025, 4.0525, 4.2025, 4.3525, 4.5025, 4.6525, 4.8025, 4.9525, 5.1025, 5.2525, 5.4025, 5.5525, 5.7025, 5.8525, 6.0025, 6.1525, 6.3025, 6.4525, 6.6025, 6.7525, 6.9025, 7.0525, 7.2025, 7.3525, 7.5025, 7.6525, 7.8025, 7.9525, 8.1025, 8.2525, 8.4025, 8.5525, 8.7025, 8.855, 9.12, 9.2675, 9.42, 9.57, 9.72, 9.87, 10.02, 10.17, 10.32, 10.47, 10.62, 10.77, 10.92, 11.07, 11.22, 11.37, 11.52, 11.67, 11.82, 11.97, 12.12, 12.27, 12.42, 12.57, 12.72, 12.87, 13.02, 13.17, 13.32, 13.47, 13.62, 13.77, 13.92, 14.07, 14.22, 14.37, 14.52, 14.67, 14.82, 14.97, 15.12, 15.27, 15.42, 15.57, 15.7225, 15.8725, 16.0225, 16.1725, 16.3225, 16.4725, 16.6225, 16.7725, 16.9225, 17.0725, 17.2225, 17.3725, 17.5225, 17.6725, 17.8225, 17.9725, 18.2375, 18.3875, 18.5375, 18.6875, 18.8375, 18.9875, 19.1375, 19.2875, 19.4375, 19.5875, 19.7375, 19.8875, 20.0375, 20.1875, 20.3375, 20.4875, 20.6375, 20.7875, 20.9375, 21.0875, 21.2375, 21.3875, 21.5375, 21.6875, 21.8375, 21.9875, 22.1375, 22.2875, 22.4375, 22.59, 22.74, 22.89, 23.04, 23.19, 23.34, 23.49, 23.64, 23.79, 23.94, 24.09, 24.24, 24.39, 24.54, 24.69, 24.84, 24.99, 25.14, 25.29, 25.44, 25.59, 25.74, 25.89, 26.04, 26.19, 26.34, 26.49, 26.64, 26.79, 26.94, 27.09, 27.355, 27.505, 27.655, 27.805, 27.955, 28.105, 28.255, 28.405, 28.555, 28.705, 28.855, 29.005, 29.155, 29.305, 29.4575, 29.6075, 29.7575, 29.9075, 30.0575, 30.2075, 30.3575, 30.5075, 30.6575, 30.8075, 30.9575, 31.1075, 31.2575, 31.4075, 31.5575, 31.7075, 31.8575, 32.0075, 32.1575, 32.3075, 32.4575, 32.6075, 32.7575, 32.9075, 33.0575, 33.2075, 33.3575, 33.5075, 33.6575, 33.8075, 33.9575, 34.1075, 34.2575, 34.4075, 34.5575, 34.7075, 34.8575, 35.0075, 35.1575, 35.3075, 35.4575, 35.6075, 35.76, 35.91, 36.06]
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageOrientationTextTra
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.255
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaindy Road *,CARDIFF-Note:body18 in Connectome,Wales,GB,CF24 4HQ
InstitutionNameCUBRIC_3T_West
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
MatrixCoilModeGRAPPA
ModalityMR
ParallelReductionFactorInPlane3
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps63
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescription3TWproj^314_WAND
ProtocolNamemg_ep2d_se_CBV_VE11c_BHold
PulseSequenceDetails%CustomerSeq%\mg_ep2d_se_VE11c
PulseSequenceTypeSpin Echo EPI
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE64
RefLinesPE36
RepetitionTime2.5
SAR0.0980347
ScanOptionsFS
ScanningSequenceEP
SequenceNameepse2d1_64
SequenceVariantSK\SP
SeriesDescriptionmg_ep2d_se_CBV_VE11c_BHold
SeriesNumber18
ShimSetting[9781, 132, -2657, 344, 17, 144, -31, 28]
SliceThickness6.5
SliceTiming[0, 1.3325, 0.1675, 1.5, 0.3325, 1.6675, 0.5, 1.8325, 0.6675, 2, 0.8325, 2.1675, 1, 2.3325, 1.1675]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices7.8
SpoilingStateTrue
StationNameAWP66073
TaskNamebreathhold
TotalReadoutTime0.01155
TxRefAmp226.449
md5sumb9d024cd4f768b22f740b07f8b3215d0
softwaremriqc
version22.0.0rc1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.