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@@ -64,13 +64,12 @@ To visualize the Allen CCF on top of the DAPI template:
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**ANTs**
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```
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-TRANFORMATION=ccf_to_dapi_affine_transformation.txt
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antsApplyTransforms \
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-i average_template_25.nrrd \
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-d 3 \
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-r dapi_template.nii.gz \
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-o average_template_25_registered_to_dapi.nii.gz \
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- -t ${TRANSFORMATION}
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+ -t ccf_to_dapi_affine_transformation.txt
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```
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**ITK-SNAP**
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